Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
Cks1brtQ3UNC9 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Fbxl12-205ENSMUST00000140702 1555 ntBASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Cks1brtQ3UNC9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Gm37844-201ENSMUST00000192473 4097 ntBASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Cks1brtQ3UNC9 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Gm18025-201ENSMUST00000221733 862 ntBASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Rab3c-203ENSMUST00000224180 967 ntBASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Cks1brtQ3UNC9 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms