Protein–RNA interactions for Protein: Q3UMQ8

Naf1, H/ACA ribonucleoprotein complex non-core subunit NAF1, mousemouse

Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Naf1Q3UMQ8 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Naf1Q3UMQ8 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Naf1Q3UMQ8 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Naf1Q3UMQ8 Gm45293-201ENSMUST00000209754 1812 ntBASIC15.43■□□□□ 0.06
Naf1Q3UMQ8 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.43■□□□□ 0.06
Naf1Q3UMQ8 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Naf1Q3UMQ8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Naf1Q3UMQ8 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Naf1Q3UMQ8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Gm27494-201ENSMUST00000184735 189 ntBASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Naf1Q3UMQ8 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Rpph1-201ENSMUST00000175096 319 ntBASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Naf1Q3UMQ8 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Naf1Q3UMQ8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms