Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Gm13312-201ENSMUST00000119631 718 ntBASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Otx2os1-206ENSMUST00000228153 787 ntBASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC12.97□□□□□ -0.33
Fndc4Q3TR08 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Gm27357-201ENSMUST00000183754 135 ntBASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Fndc4Q3TR08 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC12.96□□□□□ -0.34
Fndc4Q3TR08 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Fndc4Q3TR08 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Fndc4Q3TR08 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms