Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col19a1Q0VF58 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.06■□□□□ 0.16
Col19a1Q0VF58 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col19a1Q0VF58 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col19a1Q0VF58 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Col19a1Q0VF58 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
Col19a1Q0VF58 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Col19a1Q0VF58 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Gm9200-201ENSMUST00000118513 1354 ntBASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Gm13392-201ENSMUST00000117708 150 ntBASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 AC149588.3-201ENSMUST00000227515 150 ntBASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Col19a1Q0VF58 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Gm27631-201ENSMUST00000184163 466 ntBASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Col19a1Q0VF58 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm5479-201ENSMUST00000160578 435 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm29310-201ENSMUST00000185468 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21825-201ENSMUST00000185728 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm29109-201ENSMUST00000185895 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21896-201ENSMUST00000186520 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21873-201ENSMUST00000186728 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21794-201ENSMUST00000187056 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21880-201ENSMUST00000187275 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21826-201ENSMUST00000187451 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21198-201ENSMUST00000188393 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21749-201ENSMUST00000189343 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21901-201ENSMUST00000189568 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm29424-201ENSMUST00000189716 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm28599-201ENSMUST00000189838 694 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21867-201ENSMUST00000189917 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm29269-201ENSMUST00000190087 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21722-201ENSMUST00000190153 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm28423-201ENSMUST00000190701 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21899-201ENSMUST00000190745 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21910-201ENSMUST00000191163 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21849-201ENSMUST00000191571 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm28678-201ENSMUST00000191593 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm20910-201ENSMUST00000193268 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Gm21871-201ENSMUST00000194621 696 ntBASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Col19a1Q0VF58 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms