Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Gm6257-201ENSMUST00000163864 910 ntBASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Gm27742-201ENSMUST00000184667 60 ntBASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Gm45760-201ENSMUST00000212190 1782 ntBASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.7□□□□□ -0.06
Ptchd3Q0EEE2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Gm7367-201ENSMUST00000057611 492 ntBASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ptchd3Q0EEE2 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Sorbs3-204ENSMUST00000227929 2460 ntBASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Ptchd3Q0EEE2 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ptchd3Q0EEE2 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms