Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.63□□□□□ -0.39
Tff1Q08423 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.63□□□□□ -0.39
Tff1Q08423 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
Tff1Q08423 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Tff1Q08423 Gm9768-201ENSMUST00000206007 2861 ntBASIC12.63□□□□□ -0.39
Tff1Q08423 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Tff1Q08423 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tff1Q08423 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Tff1Q08423 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tff1Q08423 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC12.62□□□□□ -0.39
Tff1Q08423 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC12.62□□□□□ -0.39
Tff1Q08423 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC12.62□□□□□ -0.39
Tff1Q08423 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.62□□□□□ -0.39
Tff1Q08423 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC12.62□□□□□ -0.39
Tff1Q08423 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.62□□□□□ -0.39
Tff1Q08423 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.62□□□□□ -0.39
Tff1Q08423 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC12.62□□□□□ -0.39
Tff1Q08423 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Rps4l-201ENSMUST00000071745 943 ntBASIC12.62□□□□□ -0.39
Tff1Q08423 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Tff1Q08423 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
Tff1Q08423 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.62□□□□□ -0.39
Tff1Q08423 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Tff1Q08423 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Tff1Q08423 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tff1Q08423 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tff1Q08423 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC12.61□□□□□ -0.39
Tff1Q08423 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.61□□□□□ -0.39
Tff1Q08423 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Tff1Q08423 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Gm8349-201ENSMUST00000182720 1003 ntBASIC12.61□□□□□ -0.39
Tff1Q08423 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Tff1Q08423 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
Tff1Q08423 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
Tff1Q08423 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.61□□□□□ -0.39
Tff1Q08423 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Tff1Q08423 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Tff1Q08423 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.6□□□□□ -0.39
Tff1Q08423 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tff1Q08423 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Tff1Q08423 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Tff1Q08423 AC153794.1-201ENSMUST00000169148 126 ntBASIC12.6□□□□□ -0.39
Tff1Q08423 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC12.6□□□□□ -0.39
Tff1Q08423 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC12.6□□□□□ -0.39
Tff1Q08423 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC12.6□□□□□ -0.39
Tff1Q08423 Gm2213-201ENSMUST00000197485 688 ntBASIC12.6□□□□□ -0.39
Tff1Q08423 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC12.6□□□□□ -0.39
Tff1Q08423 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.6□□□□□ -0.39
Tff1Q08423 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms