Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Thbs3Q05895 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.33□□□□□ -0.28
Thbs3Q05895 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Thbs3Q05895 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Thbs3Q05895 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC13.33□□□□□ -0.28
Thbs3Q05895 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.33□□□□□ -0.28
Thbs3Q05895 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Thbs3Q05895 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Thbs3Q05895 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Thbs3Q05895 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Thbs3Q05895 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Thbs3Q05895 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Gm4899-201ENSMUST00000178708 719 ntBASIC13.32□□□□□ -0.28
Thbs3Q05895 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.32□□□□□ -0.28
Thbs3Q05895 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Thbs3Q05895 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Thbs3Q05895 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Gm8242-201ENSMUST00000193029 1420 ntBASIC13.31□□□□□ -0.28
Thbs3Q05895 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Thbs3Q05895 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.31□□□□□ -0.28
Thbs3Q05895 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.31□□□□□ -0.28
Thbs3Q05895 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.31□□□□□ -0.28
Thbs3Q05895 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.31□□□□□ -0.28
Thbs3Q05895 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.31□□□□□ -0.28
Thbs3Q05895 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.31□□□□□ -0.28
Thbs3Q05895 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Thbs3Q05895 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.31□□□□□ -0.28
Thbs3Q05895 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Thbs3Q05895 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.31□□□□□ -0.28
Thbs3Q05895 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC13.31□□□□□ -0.28
Thbs3Q05895 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Thbs3Q05895 Celf4-206ENSMUST00000224553 1729 ntBASIC13.3□□□□□ -0.28
Thbs3Q05895 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Thbs3Q05895 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Thbs3Q05895 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms