Protein–RNA interactions for Protein: Q04683

Cxcr5, C-X-C chemokine receptor type 5, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr5Q04683 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Cxcr5Q04683 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Gm12134-201ENSMUST00000122109 520 ntBASIC14.46□□□□□ -0.09
Cxcr5Q04683 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Gm45504-201ENSMUST00000211407 2107 ntBASIC14.46□□□□□ -0.09
Cxcr5Q04683 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Cxcr5Q04683 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Cxcr5Q04683 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Gm27867-201ENSMUST00000184778 125 ntBASIC14.45□□□□□ -0.1
Cxcr5Q04683 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Gm5837-201ENSMUST00000191844 1369 ntBASIC14.45□□□□□ -0.1
Cxcr5Q04683 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
Cxcr5Q04683 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Gm7506-201ENSMUST00000207758 815 ntBASIC14.44□□□□□ -0.1
Cxcr5Q04683 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.44□□□□□ -0.1
Cxcr5Q04683 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.44□□□□□ -0.1
Cxcr5Q04683 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcr5Q04683 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcr5Q04683 Fbxl12-205ENSMUST00000140702 1555 ntBASIC14.43□□□□□ -0.1
Cxcr5Q04683 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcr5Q04683 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcr5Q04683 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
Cxcr5Q04683 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcr5Q04683 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcr5Q04683 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Cxcr5Q04683 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms