Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nkx3-2P97503 Gm45546-201ENSMUST00000211053 2394 ntBASIC14.36□□□□□ -0.11
Nkx3-2P97503 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Gm24513-201ENSMUST00000174964 138 ntBASIC14.35□□□□□ -0.11
Nkx3-2P97503 Gm27702-201ENSMUST00000184512 56 ntBASIC14.35□□□□□ -0.11
Nkx3-2P97503 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.35□□□□□ -0.11
Nkx3-2P97503 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Nkx3-2P97503 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Nkx3-2P97503 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Nkx3-2P97503 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx3-2P97503 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx3-2P97503 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx3-2P97503 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Nkx3-2P97503 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.33□□□□□ -0.12
Nkx3-2P97503 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Gm25911-201ENSMUST00000157621 56 ntBASIC14.33□□□□□ -0.12
Nkx3-2P97503 Gm27397-201ENSMUST00000184997 107 ntBASIC14.33□□□□□ -0.12
Nkx3-2P97503 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.33□□□□□ -0.12
Nkx3-2P97503 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Gm13294-201ENSMUST00000121757 1330 ntBASIC14.33□□□□□ -0.12
Nkx3-2P97503 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Nkx3-2P97503 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms