Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Nkx2-3P97334 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Gm25144-201ENSMUST00000179561 110 ntBASIC18.97■□□□□ 0.63
Nkx2-3P97334 Gm25352-201ENSMUST00000179815 110 ntBASIC18.97■□□□□ 0.63
Nkx2-3P97334 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Gm27680-201ENSMUST00000184192 160 ntBASIC18.97■□□□□ 0.63
Nkx2-3P97334 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Nkx2-3P97334 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Gm14719-201ENSMUST00000121891 340 ntBASIC18.96■□□□□ 0.63
Nkx2-3P97334 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Shd-206ENSMUST00000225145 998 ntBASIC18.96■□□□□ 0.63
Nkx2-3P97334 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Gm5049-201ENSMUST00000195878 1590 ntBASIC18.96■□□□□ 0.63
Nkx2-3P97334 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC18.96■□□□□ 0.63
Nkx2-3P97334 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Gm6756-201ENSMUST00000180647 1620 ntBASIC18.96■□□□□ 0.63
Nkx2-3P97334 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Nkx2-3P97334 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.95■□□□□ 0.62
Nkx2-3P97334 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Mir7684-201ENSMUST00000183858 60 ntBASIC18.95■□□□□ 0.62
Nkx2-3P97334 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Nkx2-3P97334 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.94■□□□□ 0.62
Nkx2-3P97334 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Nkx2-3P97334 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Gm43195-201ENSMUST00000200614 2332 ntBASIC18.93■□□□□ 0.62
Nkx2-3P97334 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Gm5566-201ENSMUST00000116118 459 ntBASIC18.93■□□□□ 0.62
Nkx2-3P97334 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx2-3P97334 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms