Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CiitaP79621 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CiitaP79621 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CiitaP79621 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CiitaP79621 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC16.4■□□□□ 0.22
CiitaP79621 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CiitaP79621 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC16.4■□□□□ 0.22
CiitaP79621 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CiitaP79621 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Gm8242-201ENSMUST00000193029 1420 ntBASIC16.4■□□□□ 0.22
CiitaP79621 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CiitaP79621 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
CiitaP79621 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CiitaP79621 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.4■□□□□ 0.22
CiitaP79621 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.4■□□□□ 0.22
CiitaP79621 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
CiitaP79621 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CiitaP79621 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CiitaP79621 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC16.4■□□□□ 0.22
CiitaP79621 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Gm15939-201ENSMUST00000160756 2147 ntTSL 5 BASIC16.39■□□□□ 0.21
CiitaP79621 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CiitaP79621 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC16.39■□□□□ 0.21
CiitaP79621 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Gm43767-201ENSMUST00000198933 381 ntBASIC16.39■□□□□ 0.21
CiitaP79621 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.39■□□□□ 0.21
CiitaP79621 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
CiitaP79621 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
CiitaP79621 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC16.39■□□□□ 0.21
CiitaP79621 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC16.39■□□□□ 0.21
CiitaP79621 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CiitaP79621 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC16.38■□□□□ 0.21
CiitaP79621 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.38■□□□□ 0.21
CiitaP79621 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC16.38■□□□□ 0.21
CiitaP79621 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.38■□□□□ 0.21
CiitaP79621 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC16.38■□□□□ 0.21
CiitaP79621 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CiitaP79621 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC16.38■□□□□ 0.21
CiitaP79621 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CiitaP79621 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
CiitaP79621 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Prnd-202ENSMUST00000110170 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CiitaP79621 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms