Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Mir5130-201ENSMUST00000175160 84 ntBASIC15.8■□□□□ 0.12
Surf6P70279 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.8■□□□□ 0.12
Surf6P70279 Gm45058-201ENSMUST00000205810 766 ntBASIC15.8■□□□□ 0.12
Surf6P70279 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Surf6P70279 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Surf6P70279 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.8■□□□□ 0.12
Surf6P70279 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Surf6P70279 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC15.8■□□□□ 0.12
Surf6P70279 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC15.79■□□□□ 0.12
Surf6P70279 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Surf6P70279 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC15.79■□□□□ 0.12
Surf6P70279 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Surf6P70279 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Surf6P70279 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Surf6P70279 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC15.79■□□□□ 0.12
Surf6P70279 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.79■□□□□ 0.12
Surf6P70279 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Surf6P70279 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Surf6P70279 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Surf6P70279 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Surf6P70279 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Surf6P70279 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Surf6P70279 Gm38318-201ENSMUST00000195769 1706 ntBASIC15.78■□□□□ 0.12
Surf6P70279 Gm10013-201ENSMUST00000106074 672 ntBASIC15.78■□□□□ 0.12
Surf6P70279 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Surf6P70279 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Surf6P70279 Gm23547-201ENSMUST00000158210 271 ntBASIC15.78■□□□□ 0.12
Surf6P70279 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC15.78■□□□□ 0.12
Surf6P70279 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC15.78■□□□□ 0.12
Surf6P70279 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.78■□□□□ 0.12
Surf6P70279 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Gm7367-201ENSMUST00000057611 492 ntBASIC15.78■□□□□ 0.12
Surf6P70279 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Surf6P70279 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.78■□□□□ 0.12
Surf6P70279 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Surf6P70279 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Surf6P70279 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.12
Surf6P70279 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 CT030684.3-201ENSMUST00000227308 2445 ntBASIC15.77■□□□□ 0.12
Surf6P70279 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Surf6P70279 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.77■□□□□ 0.12
Surf6P70279 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Surf6P70279 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC15.77■□□□□ 0.12
Surf6P70279 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.77■□□□□ 0.12
Surf6P70279 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Surf6P70279 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Surf6P70279 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Surf6P70279 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Surf6P70279 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Surf6P70279 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms