Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 AC159649.2-201ENSMUST00000222984 3223 ntBASIC10.85□□□□□ -0.67
Rpl39P62892 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Rpl39P62892 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Rpl39P62892 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rpl39P62892 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Rpl39P62892 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Rpl39P62892 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Rpl39P62892 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rpl39P62892 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rpl39P62892 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rpl39P62892 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Rpl39P62892 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Rpl39P62892 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Gm12669-201ENSMUST00000122162 1009 ntBASIC10.84□□□□□ -0.67
Rpl39P62892 Gm27011-201ENSMUST00000182352 972 ntBASIC10.84□□□□□ -0.67
Rpl39P62892 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.84□□□□□ -0.67
Rpl39P62892 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC10.84□□□□□ -0.67
Rpl39P62892 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.84□□□□□ -0.67
Rpl39P62892 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.84□□□□□ -0.67
Rpl39P62892 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Rpl39P62892 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Gm45779-201ENSMUST00000212189 4064 ntBASIC10.84□□□□□ -0.67
Rpl39P62892 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Rpl39P62892 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Rpl39P62892 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
Rpl39P62892 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC10.83□□□□□ -0.68
Rpl39P62892 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC10.83□□□□□ -0.68
Rpl39P62892 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.83□□□□□ -0.68
Rpl39P62892 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC10.83□□□□□ -0.68
Rpl39P62892 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC10.83□□□□□ -0.68
Rpl39P62892 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Rpl39P62892 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Rpl39P62892 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Rpl39P62892 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms