Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Lsm3P62311 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Lsm3P62311 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Gm5049-201ENSMUST00000195878 1590 ntBASIC13.89□□□□□ -0.19
Lsm3P62311 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Gm11539-201ENSMUST00000119837 557 ntBASIC13.89□□□□□ -0.19
Lsm3P62311 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC13.89□□□□□ -0.19
Lsm3P62311 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC13.89□□□□□ -0.19
Lsm3P62311 Gm29707-201ENSMUST00000196325 491 ntBASIC13.89□□□□□ -0.19
Lsm3P62311 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.89□□□□□ -0.19
Lsm3P62311 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Lsm3P62311 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.89□□□□□ -0.19
Lsm3P62311 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.89□□□□□ -0.19
Lsm3P62311 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Lsm3P62311 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.88□□□□□ -0.19
Lsm3P62311 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Lsm3P62311 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Lsm3P62311 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC13.88□□□□□ -0.19
Lsm3P62311 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Lsm3P62311 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC13.88□□□□□ -0.19
Lsm3P62311 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Lsm3P62311 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC13.88□□□□□ -0.19
Lsm3P62311 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
Lsm3P62311 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Lsm3P62311 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.87□□□□□ -0.19
Lsm3P62311 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.87□□□□□ -0.19
Lsm3P62311 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.87□□□□□ -0.19
Lsm3P62311 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Matn2-206ENSMUST00000228570 2798 ntBASIC13.87□□□□□ -0.19
Lsm3P62311 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.87□□□□□ -0.19
Lsm3P62311 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Lsm3P62311 Gm11336-201ENSMUST00000118168 334 ntBASIC13.87□□□□□ -0.19
Lsm3P62311 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Lsm3P62311 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.87□□□□□ -0.19
Lsm3P62311 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Lsm3P62311 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Lsm3P62311 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Lsm3P62311 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Lsm3P62311 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms