Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
Lmo4P61969 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lmo4P61969 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lmo4P61969 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lmo4P61969 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.23□□□□□ -0.45
Lmo4P61969 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.23□□□□□ -0.45
Lmo4P61969 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lmo4P61969 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Lmo4P61969 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.23□□□□□ -0.45
Lmo4P61969 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Terf1-203ENSMUST00000188371 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.23□□□□□ -0.45
Lmo4P61969 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC12.23□□□□□ -0.45
Lmo4P61969 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Lmo4P61969 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC12.22□□□□□ -0.45
Lmo4P61969 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Lmo4P61969 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.22□□□□□ -0.45
Lmo4P61969 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lmo4P61969 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lmo4P61969 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Lmo4P61969 Gm15693-201ENSMUST00000120470 637 ntBASIC12.22□□□□□ -0.45
Lmo4P61969 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.22□□□□□ -0.45
Lmo4P61969 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Lmo4P61969 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.22□□□□□ -0.45
Lmo4P61969 Gm27920-201ENSMUST00000183953 96 ntBASIC12.22□□□□□ -0.45
Lmo4P61969 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lmo4P61969 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lmo4P61969 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
Lmo4P61969 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Lmo4P61969 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC12.22□□□□□ -0.45
Lmo4P61969 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.21□□□□□ -0.45
Lmo4P61969 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lmo4P61969 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Lmo4P61969 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Lmo4P61969 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lmo4P61969 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Lmo4P61969 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Lmo4P61969 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Lmo4P61969 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.21□□□□□ -0.45
Lmo4P61969 Gm9824-201ENSMUST00000178707 561 ntBASIC12.21□□□□□ -0.45
Lmo4P61969 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Lmo4P61969 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Lmo4P61969 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms