Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Nphp4P59240 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nphp4P59240 Gm6756-201ENSMUST00000180647 1620 ntBASIC20.42■□□□□ 0.86
Nphp4P59240 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Nphp4P59240 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nphp4P59240 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Nphp4P59240 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC20.42■□□□□ 0.86
Nphp4P59240 Gm8410-201ENSMUST00000117225 605 ntBASIC20.42■□□□□ 0.86
Nphp4P59240 Gm6944-201ENSMUST00000182449 1006 ntBASIC20.42■□□□□ 0.86
Nphp4P59240 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC20.42■□□□□ 0.86
Nphp4P59240 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Nphp4P59240 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Nphp4P59240 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Nphp4P59240 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC20.41■□□□□ 0.86
Nphp4P59240 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
Nphp4P59240 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Gm12428-201ENSMUST00000119844 727 ntBASIC20.41■□□□□ 0.86
Nphp4P59240 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC20.41■□□□□ 0.86
Nphp4P59240 BC037039-201ENSMUST00000192003 2205 ntBASIC20.41■□□□□ 0.86
Nphp4P59240 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Nphp4P59240 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Nphp4P59240 Gm26917-202ENSMUST00000192833 3329 ntBASIC20.4■□□□□ 0.86
Nphp4P59240 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC20.4■□□□□ 0.86
Nphp4P59240 Gm17837-201ENSMUST00000186435 985 ntBASIC20.4■□□□□ 0.86
Nphp4P59240 Gm37230-201ENSMUST00000194491 818 ntBASIC20.4■□□□□ 0.86
Nphp4P59240 Gm7775-201ENSMUST00000218871 853 ntBASIC20.4■□□□□ 0.86
Nphp4P59240 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Nphp4P59240 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC20.4■□□□□ 0.86
Nphp4P59240 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Nphp4P59240 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Nphp4P59240 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Nphp4P59240 Gm5566-201ENSMUST00000116118 459 ntBASIC20.39■□□□□ 0.85
Nphp4P59240 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC20.39■□□□□ 0.85
Nphp4P59240 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC20.39■□□□□ 0.85
Nphp4P59240 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Nphp4P59240 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC20.39■□□□□ 0.85
Nphp4P59240 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nphp4P59240 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nphp4P59240 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC20.39■□□□□ 0.85
Nphp4P59240 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nphp4P59240 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Nphp4P59240 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nphp4P59240 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nphp4P59240 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 Gm14767-201ENSMUST00000121559 586 ntBASIC20.38■□□□□ 0.85
Nphp4P59240 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 Mir7684-201ENSMUST00000183858 60 ntBASIC20.38■□□□□ 0.85
Nphp4P59240 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC20.38■□□□□ 0.85
Nphp4P59240 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Nphp4P59240 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 Gm9063-201ENSMUST00000223299 582 ntBASIC20.38■□□□□ 0.85
Nphp4P59240 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Nphp4P59240 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms