Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Tpm2P58774 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.47■□□□□ 0.39
Tpm2P58774 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Tpm2P58774 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.47■□□□□ 0.39
Tpm2P58774 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.47■□□□□ 0.39
Tpm2P58774 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Tpm2P58774 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Nupl1-207ENSMUST00000225311 2475 ntBASIC17.47■□□□□ 0.39
Tpm2P58774 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tpm2P58774 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Tpm2P58774 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tpm2P58774 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Gm9889-202ENSMUST00000206983 1577 ntBASIC17.46■□□□□ 0.39
Tpm2P58774 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Tpm2P58774 Gm38197-201ENSMUST00000192320 2122 ntBASIC17.46■□□□□ 0.39
Tpm2P58774 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Coq7-201ENSMUST00000032887 914 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tpm2P58774 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tpm2P58774 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tpm2P58774 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Tpm2P58774 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Tpm2P58774 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Tpm2P58774 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tpm2P58774 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Tpm2P58774 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tpm2P58774 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC17.45■□□□□ 0.38
Tpm2P58774 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.45■□□□□ 0.38
Tpm2P58774 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC17.45■□□□□ 0.38
Tpm2P58774 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Tpm2P58774 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tpm2P58774 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tpm2P58774 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.44■□□□□ 0.38
Tpm2P58774 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC17.44■□□□□ 0.38
Tpm2P58774 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC17.44■□□□□ 0.38
Tpm2P58774 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tpm2P58774 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 AC153881.2-201ENSMUST00000214877 204 ntBASIC17.44■□□□□ 0.38
Tpm2P58774 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Tpm2P58774 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Tpm2P58774 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tpm2P58774 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tpm2P58774 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Tpm2P58774 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC17.44■□□□□ 0.38
Tpm2P58774 Camk2g-217ENSMUST00000226630 1937 ntBASIC17.44■□□□□ 0.38
Tpm2P58774 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
Tpm2P58774 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tpm2P58774 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms