Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
RoraP51448 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 AC093043.3-201ENSMUST00000226531 2273 ntBASIC14.35□□□□□ -0.11
RoraP51448 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
RoraP51448 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Prob1-201ENSMUST00000097619 3021 ntBASIC14.35□□□□□ -0.11
RoraP51448 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.35□□□□□ -0.11
RoraP51448 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC14.35□□□□□ -0.11
RoraP51448 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
RoraP51448 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
RoraP51448 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
RoraP51448 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RoraP51448 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Gm29361-201ENSMUST00000183323 2000 ntBASIC14.34□□□□□ -0.11
RoraP51448 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RoraP51448 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
RoraP51448 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC14.34□□□□□ -0.11
RoraP51448 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RoraP51448 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Gm27301-201ENSMUST00000184012 127 ntBASIC14.34□□□□□ -0.11
RoraP51448 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.34□□□□□ -0.11
RoraP51448 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
RoraP51448 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
RoraP51448 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
RoraP51448 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
RoraP51448 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.34□□□□□ -0.11
RoraP51448 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
RoraP51448 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.33□□□□□ -0.11
RoraP51448 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RoraP51448 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RoraP51448 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
RoraP51448 Cuedc2-202ENSMUST00000167861 1941 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
RoraP51448 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.33□□□□□ -0.12
RoraP51448 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
RoraP51448 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.33□□□□□ -0.12
RoraP51448 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.33□□□□□ -0.12
RoraP51448 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.33□□□□□ -0.12
RoraP51448 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RoraP51448 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.33□□□□□ -0.12
RoraP51448 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 App-207ENSMUST00000227737 2827 ntBASIC14.33□□□□□ -0.12
RoraP51448 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
RoraP51448 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RoraP51448 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms