Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Sox18P43680 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.54□□□□□ -0.08
Sox18P43680 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Sox18P43680 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox18P43680 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Sox18P43680 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox18P43680 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox18P43680 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox18P43680 Gm9824-201ENSMUST00000178707 561 ntBASIC14.53□□□□□ -0.08
Sox18P43680 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.53□□□□□ -0.08
Sox18P43680 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Sox18P43680 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Sox18P43680 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Sox18P43680 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.52□□□□□ -0.08
Sox18P43680 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Sox18P43680 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox18P43680 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Sox18P43680 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox18P43680 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Sox18P43680 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Sox18P43680 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Sox18P43680 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.52□□□□□ -0.09
Sox18P43680 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Gm6912-201ENSMUST00000117218 544 ntBASIC14.52□□□□□ -0.09
Sox18P43680 Gm8410-201ENSMUST00000117225 605 ntBASIC14.52□□□□□ -0.09
Sox18P43680 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Gm14719-201ENSMUST00000121891 340 ntBASIC14.52□□□□□ -0.09
Sox18P43680 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.52□□□□□ -0.09
Sox18P43680 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Sox18P43680 Gm28631-201ENSMUST00000190740 334 ntBASIC14.52□□□□□ -0.09
Sox18P43680 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC14.52□□□□□ -0.09
Sox18P43680 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.52□□□□□ -0.09
Sox18P43680 Gm10154-201ENSMUST00000084445 354 ntBASIC14.52□□□□□ -0.09
Sox18P43680 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Sox18P43680 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sox18P43680 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Sox18P43680 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
Sox18P43680 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Sox18P43680 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Sox18P43680 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC14.51□□□□□ -0.09
Sox18P43680 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Sox18P43680 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sox18P43680 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Sox18P43680 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
Sox18P43680 Gm6973-201ENSMUST00000117080 721 ntBASIC14.51□□□□□ -0.09
Sox18P43680 Gm6257-201ENSMUST00000163864 910 ntBASIC14.51□□□□□ -0.09
Sox18P43680 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Sox18P43680 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC14.51□□□□□ -0.09
Sox18P43680 Gm6991-201ENSMUST00000218475 1178 ntBASIC14.51□□□□□ -0.09
Sox18P43680 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms