Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nkx2-2P42586 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Gm29361-201ENSMUST00000183323 2000 ntBASIC13.91□□□□□ -0.18
Nkx2-2P42586 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.91□□□□□ -0.18
Nkx2-2P42586 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Gm18733-201ENSMUST00000173950 856 ntBASIC13.91□□□□□ -0.18
Nkx2-2P42586 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.91□□□□□ -0.18
Nkx2-2P42586 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC13.91□□□□□ -0.18
Nkx2-2P42586 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-2P42586 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.91□□□□□ -0.18
Nkx2-2P42586 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.91□□□□□ -0.18
Nkx2-2P42586 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nkx2-2P42586 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.9□□□□□ -0.18
Nkx2-2P42586 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Gm27300-201ENSMUST00000184085 97 ntBASIC13.9□□□□□ -0.18
Nkx2-2P42586 Gm27335-201ENSMUST00000184758 97 ntBASIC13.9□□□□□ -0.18
Nkx2-2P42586 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Nkx2-2P42586 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.9□□□□□ -0.18
Nkx2-2P42586 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Nkx2-2P42586 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.9□□□□□ -0.19
Nkx2-2P42586 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Nkx2-2P42586 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.89□□□□□ -0.19
Nkx2-2P42586 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Nkx2-2P42586 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms