Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC12.64□□□□□ -0.39
Abca1P41233 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Abca1P41233 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Abca1P41233 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Abca1P41233 Rprl2-201ENSMUST00000157150 290 ntBASIC12.63□□□□□ -0.39
Abca1P41233 Gm9682-201ENSMUST00000197505 556 ntBASIC12.63□□□□□ -0.39
Abca1P41233 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Abca1P41233 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Abca1P41233 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Abca1P41233 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Abca1P41233 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
Abca1P41233 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Abca1P41233 Chst3-203ENSMUST00000167915 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
Abca1P41233 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC12.63□□□□□ -0.39
Abca1P41233 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Abca1P41233 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Abca1P41233 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.62□□□□□ -0.39
Abca1P41233 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 AC124732.2-201ENSMUST00000221977 316 ntBASIC12.62□□□□□ -0.39
Abca1P41233 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Mir6977-201ENSMUST00000184960 64 ntBASIC12.62□□□□□ -0.39
Abca1P41233 Gm43125-201ENSMUST00000201724 730 ntBASIC12.62□□□□□ -0.39
Abca1P41233 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.62□□□□□ -0.39
Abca1P41233 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Abca1P41233 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Abca1P41233 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Abca1P41233 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 App-207ENSMUST00000227737 2827 ntBASIC12.61□□□□□ -0.39
Abca1P41233 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC12.61□□□□□ -0.39
Abca1P41233 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Abca1P41233 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC12.61□□□□□ -0.39
Abca1P41233 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Abca1P41233 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.61□□□□□ -0.39
Abca1P41233 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms