Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.53□□□□□ -0.08
Cdh4P39038 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdh4P39038 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdh4P39038 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.53□□□□□ -0.08
Cdh4P39038 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
Cdh4P39038 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC14.53□□□□□ -0.08
Cdh4P39038 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdh4P39038 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Cdh4P39038 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Cdh4P39038 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.52□□□□□ -0.08
Cdh4P39038 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 Gm38318-201ENSMUST00000195769 1706 ntBASIC14.52□□□□□ -0.08
Cdh4P39038 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC14.52□□□□□ -0.08
Cdh4P39038 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Cdh4P39038 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC14.52□□□□□ -0.08
Cdh4P39038 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdh4P39038 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.52□□□□□ -0.09
Cdh4P39038 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.52□□□□□ -0.09
Cdh4P39038 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.52□□□□□ -0.09
Cdh4P39038 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Cdh4P39038 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Cdh4P39038 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.51□□□□□ -0.09
Cdh4P39038 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.51□□□□□ -0.09
Cdh4P39038 Gm10499-201ENSMUST00000174094 934 ntBASIC14.51□□□□□ -0.09
Cdh4P39038 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Cdh4P39038 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh4P39038 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh4P39038 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Cdh4P39038 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Cdh4P39038 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Cdh4P39038 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Cdh4P39038 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms