Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Sox5P35710 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
Sox5P35710 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Gm15358-201ENSMUST00000119249 520 ntBASIC16.59■□□□□ 0.25
Sox5P35710 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC16.59■□□□□ 0.25
Sox5P35710 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
Sox5P35710 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sox5P35710 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Gm5837-201ENSMUST00000191844 1369 ntBASIC16.59■□□□□ 0.25
Sox5P35710 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Sox5P35710 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Sox5P35710 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.25
Sox5P35710 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sox5P35710 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Sox5P35710 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox5P35710 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox5P35710 Gm43195-201ENSMUST00000200614 2332 ntBASIC16.58■□□□□ 0.25
Sox5P35710 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Sox5P35710 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Sox5P35710 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
Sox5P35710 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sox5P35710 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.58■□□□□ 0.24
Sox5P35710 Gm8655-201ENSMUST00000221159 852 ntBASIC16.58■□□□□ 0.24
Sox5P35710 CT009510.1-201ENSMUST00000227972 270 ntBASIC16.58■□□□□ 0.24
Sox5P35710 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC16.58■□□□□ 0.24
Sox5P35710 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
Sox5P35710 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Sox5P35710 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.58■□□□□ 0.24
Sox5P35710 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Sox5P35710 Gm15372-201ENSMUST00000120729 834 ntBASIC16.57■□□□□ 0.24
Sox5P35710 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Gm27704-201ENSMUST00000185094 107 ntBASIC16.57■□□□□ 0.24
Sox5P35710 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Sox5P35710 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
Sox5P35710 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Sox5P35710 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC16.57■□□□□ 0.24
Sox5P35710 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Sox5P35710 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC16.56■□□□□ 0.24
Sox5P35710 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Sox5P35710 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms