Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.04□□□□□ -0.16
Thbs1P35441 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs1P35441 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs1P35441 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs1P35441 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs1P35441 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Thbs1P35441 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Thbs1P35441 Gm44443-201ENSMUST00000204396 5633 ntBASIC14.04□□□□□ -0.16
Thbs1P35441 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Thbs1P35441 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Thbs1P35441 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.03□□□□□ -0.16
Thbs1P35441 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.03□□□□□ -0.16
Thbs1P35441 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.03□□□□□ -0.16
Thbs1P35441 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Gm5864-201ENSMUST00000202263 970 ntBASIC14.03□□□□□ -0.16
Thbs1P35441 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.03□□□□□ -0.16
Thbs1P35441 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Thbs1P35441 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Thbs1P35441 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Gm11960-202ENSMUST00000181063 2858 ntBASIC14.03□□□□□ -0.16
Thbs1P35441 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Thbs1P35441 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.02□□□□□ -0.16
Thbs1P35441 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs1P35441 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs1P35441 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs1P35441 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs1P35441 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs1P35441 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Thbs1P35441 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Thbs1P35441 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs1P35441 Gm37153-201ENSMUST00000193637 231 ntBASIC14.02□□□□□ -0.17
Thbs1P35441 Gm6443-201ENSMUST00000203599 874 ntBASIC14.02□□□□□ -0.17
Thbs1P35441 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs1P35441 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs1P35441 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs1P35441 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs1P35441 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs1P35441 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Thbs1P35441 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Thbs1P35441 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Thbs1P35441 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Thbs1P35441 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.01□□□□□ -0.17
Thbs1P35441 Gm10499-201ENSMUST00000174094 934 ntBASIC14.01□□□□□ -0.17
Thbs1P35441 Gm18558-201ENSMUST00000186253 1214 ntBASIC14.01□□□□□ -0.17
Thbs1P35441 Rps4l-201ENSMUST00000071745 943 ntBASIC14.01□□□□□ -0.17
Thbs1P35441 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.01□□□□□ -0.17
Thbs1P35441 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Thbs1P35441 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Thbs1P35441 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Thbs1P35441 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Thbs1P35441 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14□□□□□ -0.17
Thbs1P35441 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Gm37500-201ENSMUST00000192059 1443 ntBASIC14□□□□□ -0.17
Thbs1P35441 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC14□□□□□ -0.17
Thbs1P35441 Gm7222-201ENSMUST00000117512 906 ntBASIC14□□□□□ -0.17
Thbs1P35441 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms