Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab5cP35278 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.4□□□□□ -0.42
Rab5cP35278 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Rab5cP35278 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC12.4□□□□□ -0.42
Rab5cP35278 Gm7791-201ENSMUST00000219066 539 ntBASIC12.4□□□□□ -0.42
Rab5cP35278 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.4□□□□□ -0.42
Rab5cP35278 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.4□□□□□ -0.42
Rab5cP35278 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Rab5cP35278 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rab5cP35278 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Rab5cP35278 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.4□□□□□ -0.42
Rab5cP35278 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Rab5cP35278 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab5cP35278 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab5cP35278 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Rab5cP35278 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Rab5cP35278 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC12.4□□□□□ -0.43
Rab5cP35278 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.39□□□□□ -0.43
Rab5cP35278 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC12.39□□□□□ -0.43
Rab5cP35278 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC12.39□□□□□ -0.43
Rab5cP35278 Gm12085-201ENSMUST00000119263 940 ntBASIC12.39□□□□□ -0.43
Rab5cP35278 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC12.39□□□□□ -0.43
Rab5cP35278 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.39□□□□□ -0.43
Rab5cP35278 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Rab5cP35278 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Rab5cP35278 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Rab5cP35278 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Rab5cP35278 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.38□□□□□ -0.43
Rab5cP35278 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
Rab5cP35278 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.38□□□□□ -0.43
Rab5cP35278 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Rab5cP35278 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms