Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Sftpa1P35242 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Lhfpl3-202ENSMUST00000197992 3115 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.98□□□□□ -0.17
Sftpa1P35242 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Gm8096-201ENSMUST00000209921 1591 ntBASIC13.98□□□□□ -0.17
Sftpa1P35242 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.98□□□□□ -0.17
Sftpa1P35242 Gm9063-201ENSMUST00000223299 582 ntBASIC13.98□□□□□ -0.17
Sftpa1P35242 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Sftpa1P35242 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC13.98□□□□□ -0.17
Sftpa1P35242 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Sftpa1P35242 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Sftpa1P35242 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Sftpa1P35242 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Sftpa1P35242 Gm38327-201ENSMUST00000195852 1755 ntBASIC13.97□□□□□ -0.17
Sftpa1P35242 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC13.97□□□□□ -0.17
Sftpa1P35242 Gm14719-201ENSMUST00000121891 340 ntBASIC13.97□□□□□ -0.17
Sftpa1P35242 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.97□□□□□ -0.17
Sftpa1P35242 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.97□□□□□ -0.17
Sftpa1P35242 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
Sftpa1P35242 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Sftpa1P35242 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Sftpa1P35242 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC13.97□□□□□ -0.17
Sftpa1P35242 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.97□□□□□ -0.17
Sftpa1P35242 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Sftpa1P35242 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC13.97□□□□□ -0.17
Sftpa1P35242 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Sftpa1P35242 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.96□□□□□ -0.17
Sftpa1P35242 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.96□□□□□ -0.17
Sftpa1P35242 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Sftpa1P35242 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.96□□□□□ -0.17
Sftpa1P35242 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Sftpa1P35242 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.96□□□□□ -0.17
Sftpa1P35242 Gm18766-201ENSMUST00000189811 808 ntBASIC13.96□□□□□ -0.17
Sftpa1P35242 Gm9794-201ENSMUST00000202370 423 ntBASIC13.96□□□□□ -0.17
Sftpa1P35242 Gm18049-201ENSMUST00000208909 581 ntBASIC13.96□□□□□ -0.17
Sftpa1P35242 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Sftpa1P35242 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.96□□□□□ -0.17
Sftpa1P35242 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Sftpa1P35242 Lrrc42-201ENSMUST00000030360 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sftpa1P35242 Gm28265-201ENSMUST00000188201 2319 ntBASIC13.96□□□□□ -0.18
Sftpa1P35242 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Sftpa1P35242 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Sftpa1P35242 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Gm13216-201ENSMUST00000117145 591 ntBASIC13.95□□□□□ -0.18
Sftpa1P35242 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Sftpa1P35242 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms