Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
BdnfP21237 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC14.57□□□□□ -0.08
BdnfP21237 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.57□□□□□ -0.08
BdnfP21237 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
BdnfP21237 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
BdnfP21237 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.56□□□□□ -0.08
BdnfP21237 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
BdnfP21237 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Gm27867-201ENSMUST00000184778 125 ntBASIC14.56□□□□□ -0.08
BdnfP21237 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
BdnfP21237 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.56□□□□□ -0.08
BdnfP21237 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Vti1a-206ENSMUST00000225529 1244 ntBASIC14.56□□□□□ -0.08
BdnfP21237 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC14.56□□□□□ -0.08
BdnfP21237 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
BdnfP21237 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
BdnfP21237 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
BdnfP21237 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.55□□□□□ -0.08
BdnfP21237 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
BdnfP21237 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.55□□□□□ -0.08
BdnfP21237 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
BdnfP21237 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
BdnfP21237 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.54□□□□□ -0.08
BdnfP21237 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
BdnfP21237 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
BdnfP21237 Fam107b-203ENSMUST00000115053 688 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
BdnfP21237 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC14.54□□□□□ -0.08
BdnfP21237 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.54□□□□□ -0.08
BdnfP21237 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
BdnfP21237 Gm25745-201ENSMUST00000174945 133 ntBASIC14.54□□□□□ -0.08
BdnfP21237 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
BdnfP21237 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
BdnfP21237 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
BdnfP21237 Gm33142-201ENSMUST00000193913 867 ntBASIC14.54□□□□□ -0.08
BdnfP21237 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms