Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC13.65□□□□□ -0.22
Cd48P18181 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC13.65□□□□□ -0.22
Cd48P18181 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Cd48P18181 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.65□□□□□ -0.22
Cd48P18181 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cd48P18181 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Cd48P18181 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cd48P18181 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cd48P18181 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cd48P18181 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.65□□□□□ -0.22
Cd48P18181 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.23
Cd48P18181 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC13.64□□□□□ -0.23
Cd48P18181 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Cd48P18181 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Gm25745-201ENSMUST00000174945 133 ntBASIC13.64□□□□□ -0.23
Cd48P18181 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.64□□□□□ -0.23
Cd48P18181 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Cd48P18181 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Cd48P18181 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.64□□□□□ -0.23
Cd48P18181 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cd48P18181 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cd48P18181 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cd48P18181 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Gm5837-201ENSMUST00000191844 1369 ntBASIC13.63□□□□□ -0.23
Cd48P18181 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC13.63□□□□□ -0.23
Cd48P18181 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cd48P18181 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Gm33142-201ENSMUST00000193913 867 ntBASIC13.63□□□□□ -0.23
Cd48P18181 AC153889.1-201ENSMUST00000219257 330 ntBASIC13.63□□□□□ -0.23
Cd48P18181 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cd48P18181 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cd48P18181 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cd48P18181 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cd48P18181 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
Cd48P18181 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cd48P18181 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cd48P18181 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC13.62□□□□□ -0.23
Cd48P18181 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.62□□□□□ -0.23
Cd48P18181 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 Gm14859-201ENSMUST00000117752 357 ntBASIC13.62□□□□□ -0.23
Cd48P18181 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Cd48P18181 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Cd48P18181 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC13.62□□□□□ -0.23
Cd48P18181 Gm8655-201ENSMUST00000221159 852 ntBASIC13.62□□□□□ -0.23
Cd48P18181 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 AC117588.1-201ENSMUST00000228510 999 ntBASIC13.62□□□□□ -0.23
Cd48P18181 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cd48P18181 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms