Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC17.61■□□□□ 0.41
Col1a1P11087 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col1a1P11087 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Col1a1P11087 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Col1a1P11087 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col1a1P11087 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Col1a1P11087 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col1a1P11087 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col1a1P11087 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC17.59■□□□□ 0.41
Col1a1P11087 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Col1a1P11087 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Col1a1P11087 Gm12138-201ENSMUST00000122180 951 ntBASIC17.59■□□□□ 0.41
Col1a1P11087 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC17.59■□□□□ 0.41
Col1a1P11087 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.59■□□□□ 0.41
Col1a1P11087 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC17.59■□□□□ 0.41
Col1a1P11087 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Gm45059-201ENSMUST00000205558 1077 ntBASIC17.59■□□□□ 0.41
Col1a1P11087 Gm45668-201ENSMUST00000211271 493 ntBASIC17.59■□□□□ 0.41
Col1a1P11087 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC17.59■□□□□ 0.41
Col1a1P11087 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Ldb3-207ENSMUST00000227819 1499 ntBASIC17.59■□□□□ 0.41
Col1a1P11087 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.59■□□□□ 0.41
Col1a1P11087 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col1a1P11087 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC17.58■□□□□ 0.41
Col1a1P11087 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
Col1a1P11087 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC17.58■□□□□ 0.41
Col1a1P11087 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC17.58■□□□□ 0.41
Col1a1P11087 Gm42612-201ENSMUST00000197986 623 ntBASIC17.58■□□□□ 0.41
Col1a1P11087 Gm43170-201ENSMUST00000199827 612 ntBASIC17.58■□□□□ 0.41
Col1a1P11087 Gm15823-201ENSMUST00000064305 670 ntBASIC17.58■□□□□ 0.41
Col1a1P11087 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col1a1P11087 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a1P11087 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a1P11087 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a1P11087 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Col1a1P11087 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a1P11087 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a1P11087 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col1a1P11087 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Col1a1P11087 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC17.57■□□□□ 0.4
Col1a1P11087 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC17.57■□□□□ 0.4
Col1a1P11087 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC17.57■□□□□ 0.4
Col1a1P11087 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 AC069562.2-201ENSMUST00000224644 2146 ntBASIC17.57■□□□□ 0.4
Col1a1P11087 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.57■□□□□ 0.4
Col1a1P11087 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Col1a1P11087 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col1a1P11087 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms