Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Bloc1s5-203ENSMUST00000224902 612 ntBASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ly6c1P0CW02 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Fbxo5-201ENSMUST00000019907 1940 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Mir3113-201ENSMUST00000175478 76 ntBASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 BC037039-201ENSMUST00000192003 2205 ntBASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ly6c1P0CW02 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 AC132104.2-201ENSMUST00000215011 266 ntBASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ly6c1P0CW02 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ly6c1P0CW02 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ly6c1P0CW02 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ly6c1P0CW02 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ly6c1P0CW02 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ly6c1P0CW02 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ly6c1P0CW02 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ly6c1P0CW02 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms