Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
P06344 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
P06344 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
P06344 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
P06344 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
P06344 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
P06344 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.24
P06344 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.52□□□□□ -0.24
P06344 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
P06344 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.52□□□□□ -0.25
P06344 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.52□□□□□ -0.25
P06344 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
P06344 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
P06344 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.52□□□□□ -0.25
P06344 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
P06344 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
P06344 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.51□□□□□ -0.25
P06344 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
P06344 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC13.51□□□□□ -0.25
P06344 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
P06344 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.51□□□□□ -0.25
P06344 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Gm4995-201ENSMUST00000117247 432 ntBASIC13.51□□□□□ -0.25
P06344 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.51□□□□□ -0.25
P06344 Gm10499-201ENSMUST00000174094 934 ntBASIC13.51□□□□□ -0.25
P06344 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.51□□□□□ -0.25
P06344 CT943659.1-201ENSMUST00000215459 326 ntBASIC13.51□□□□□ -0.25
P06344 Gm18246-201ENSMUST00000221023 728 ntBASIC13.51□□□□□ -0.25
P06344 Gm10175-201ENSMUST00000086013 645 ntBASIC13.51□□□□□ -0.25
P06344 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
P06344 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
P06344 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.5□□□□□ -0.25
P06344 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.5□□□□□ -0.25
P06344 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.5□□□□□ -0.25
P06344 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.5□□□□□ -0.25
P06344 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.5□□□□□ -0.25
P06344 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
P06344 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.5□□□□□ -0.25
P06344 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
P06344 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.5□□□□□ -0.25
P06344 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
P06344 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms