Protein–RNA interactions for Protein: P01788

Ig heavy chain V region H8, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01788 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
P01788 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
P01788 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
P01788 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
P01788 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
P01788 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
P01788 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 AC159093.1-201ENSMUST00000227779 380 ntBASIC12.02□□□□□ -0.49
P01788 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.02□□□□□ -0.49
P01788 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
P01788 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
P01788 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
P01788 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.01□□□□□ -0.49
P01788 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.01□□□□□ -0.49
P01788 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
P01788 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
P01788 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P01788 Olfr129-201ENSMUST00000122318 993 ntBASIC12.01□□□□□ -0.49
P01788 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
P01788 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 AC127349.1-201ENSMUST00000224590 266 ntBASIC12.01□□□□□ -0.49
P01788 Vti1a-206ENSMUST00000225529 1244 ntBASIC12.01□□□□□ -0.49
P01788 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P01788 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC12.01□□□□□ -0.49
P01788 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
P01788 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
P01788 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12.01□□□□□ -0.49
P01788 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
P01788 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
P01788 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
P01788 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC12□□□□□ -0.49
P01788 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
P01788 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC12□□□□□ -0.49
P01788 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC12□□□□□ -0.49
P01788 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12□□□□□ -0.49
P01788 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
P01788 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
P01788 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
P01788 Gm30437-201ENSMUST00000206086 1201 ntBASIC12□□□□□ -0.49
P01788 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC12□□□□□ -0.49
P01788 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC12□□□□□ -0.49
P01788 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC12□□□□□ -0.49
P01788 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12□□□□□ -0.49
P01788 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
P01788 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms