Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.12□□□□□ -0.31
Igh-VJ558P01758 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Gm4899-201ENSMUST00000178708 719 ntBASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Gm5864-201ENSMUST00000202263 970 ntBASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Gm7787-201ENSMUST00000216858 688 ntBASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Igh-VJ558P01758 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Igh-VJ558P01758 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Igh-VJ558P01758 Gm28659-201ENSMUST00000188013 759 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 89.4 ms