Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vti1aO89116 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Vti1aO89116 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vti1aO89116 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vti1aO89116 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vti1aO89116 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC16.36■□□□□ 0.21
Vti1aO89116 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vti1aO89116 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vti1aO89116 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vti1aO89116 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vti1aO89116 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vti1aO89116 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC16.35■□□□□ 0.21
Vti1aO89116 Mir1895-201ENSMUST00000122615 79 ntBASIC16.35■□□□□ 0.21
Vti1aO89116 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Gm27494-201ENSMUST00000184735 189 ntBASIC16.35■□□□□ 0.21
Vti1aO89116 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC16.35■□□□□ 0.21
Vti1aO89116 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC16.35■□□□□ 0.21
Vti1aO89116 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Vti1aO89116 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Vti1aO89116 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
Vti1aO89116 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Vti1aO89116 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Vti1aO89116 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vti1aO89116 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Gm38318-201ENSMUST00000195769 1706 ntBASIC16.34■□□□□ 0.21
Vti1aO89116 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vti1aO89116 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Vti1aO89116 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC16.34■□□□□ 0.21
Vti1aO89116 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC16.34■□□□□ 0.21
Vti1aO89116 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.34■□□□□ 0.21
Vti1aO89116 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.34■□□□□ 0.21
Vti1aO89116 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC16.34■□□□□ 0.21
Vti1aO89116 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vti1aO89116 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Vti1aO89116 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Vti1aO89116 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.34■□□□□ 0.21
Vti1aO89116 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Vti1aO89116 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC16.34■□□□□ 0.21
Vti1aO89116 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Vti1aO89116 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vti1aO89116 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Vti1aO89116 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vti1aO89116 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Vti1aO89116 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.33■□□□□ 0.2
Vti1aO89116 Gm13597-201ENSMUST00000121239 375 ntBASIC16.33■□□□□ 0.2
Vti1aO89116 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
Vti1aO89116 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Vti1aO89116 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Vti1aO89116 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
Vti1aO89116 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Vti1aO89116 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms