Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Abcd4O89016 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Abcd4O89016 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Abcd4O89016 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Abcd4O89016 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.76□□□□□ -0.21
Abcd4O89016 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Abcd4O89016 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Abcd4O89016 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.76□□□□□ -0.21
Abcd4O89016 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Abcd4O89016 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Abcd4O89016 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Abcd4O89016 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC13.75□□□□□ -0.21
Abcd4O89016 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Abcd4O89016 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Abcd4O89016 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
Abcd4O89016 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.75□□□□□ -0.21
Abcd4O89016 Gm45167-201ENSMUST00000208007 322 ntBASIC13.75□□□□□ -0.21
Abcd4O89016 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC13.75□□□□□ -0.21
Abcd4O89016 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.75□□□□□ -0.21
Abcd4O89016 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abcd4O89016 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Abcd4O89016 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Abcd4O89016 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC13.74□□□□□ -0.21
Abcd4O89016 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC13.74□□□□□ -0.21
Abcd4O89016 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Gm18489-201ENSMUST00000172565 551 ntBASIC13.74□□□□□ -0.21
Abcd4O89016 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Abcd4O89016 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.74□□□□□ -0.21
Abcd4O89016 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Abcd4O89016 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abcd4O89016 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Abcd4O89016 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abcd4O89016 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.73□□□□□ -0.21
Abcd4O89016 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms