Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Cacna1hO88427 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Gm14722-201ENSMUST00000118943 689 ntBASIC14.67□□□□□ -0.06
Cacna1hO88427 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cacna1hO88427 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Cacna1hO88427 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC14.67□□□□□ -0.06
Cacna1hO88427 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Cacna1hO88427 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm10766-202ENSMUST00000194123 606 ntBASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm37466-201ENSMUST00000195692 652 ntBASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm18056-201ENSMUST00000207670 568 ntBASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm18061-201ENSMUST00000208350 562 ntBASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm18063-201ENSMUST00000208529 568 ntBASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm18052-201ENSMUST00000208750 559 ntBASIC14.66□□□□□ -0.06
Cacna1hO88427 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm38230-201ENSMUST00000193572 1159 ntBASIC14.66□□□□□ -0.06
Cacna1hO88427 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Cacna1hO88427 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.66□□□□□ -0.06
Cacna1hO88427 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1hO88427 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cacna1hO88427 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 Gm2495-201ENSMUST00000191160 466 ntBASIC14.65□□□□□ -0.06
Cacna1hO88427 Gm8969-201ENSMUST00000199694 526 ntBASIC14.65□□□□□ -0.06
Cacna1hO88427 Gm18753-201ENSMUST00000201000 566 ntBASIC14.65□□□□□ -0.06
Cacna1hO88427 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Cacna1hO88427 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1hO88427 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.65□□□□□ -0.06
Cacna1hO88427 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.65□□□□□ -0.06
Cacna1hO88427 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1hO88427 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Cacna1hO88427 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 Gm42939-201ENSMUST00000197514 2205 ntBASIC14.65□□□□□ -0.06
Cacna1hO88427 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Cacna1hO88427 Gm12341-201ENSMUST00000119724 503 ntBASIC14.65□□□□□ -0.07
Cacna1hO88427 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.07
Cacna1hO88427 Gm27243-201ENSMUST00000183964 521 ntBASIC14.65□□□□□ -0.07
Cacna1hO88427 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.64□□□□□ -0.07
Cacna1hO88427 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.64□□□□□ -0.07
Cacna1hO88427 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Cacna1hO88427 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Cacna1hO88427 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Cacna1hO88427 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC14.64□□□□□ -0.07
Cacna1hO88427 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1hO88427 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1hO88427 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.63□□□□□ -0.07
Cacna1hO88427 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
Cacna1hO88427 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC14.63□□□□□ -0.07
Cacna1hO88427 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cacna1hO88427 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1hO88427 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1hO88427 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1hO88427 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC14.63□□□□□ -0.07
Cacna1hO88427 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1hO88427 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1hO88427 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1hO88427 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms