Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Ubr1O70481 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
Ubr1O70481 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Ubr1O70481 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC19.44■□□□□ 0.7
Ubr1O70481 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Ubr1O70481 AL593843.1-201ENSMUST00000195891 145 ntBASIC19.44■□□□□ 0.7
Ubr1O70481 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Ubr1O70481 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC19.44■□□□□ 0.7
Ubr1O70481 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Ubr1O70481 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC19.43■□□□□ 0.7
Ubr1O70481 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
Ubr1O70481 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
Ubr1O70481 Gm9726-201ENSMUST00000180321 678 ntBASIC19.43■□□□□ 0.7
Ubr1O70481 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC19.43■□□□□ 0.7
Ubr1O70481 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ubr1O70481 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Ubr1O70481 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Ubr1O70481 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC19.42■□□□□ 0.7
Ubr1O70481 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ubr1O70481 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Gm42612-201ENSMUST00000197986 623 ntBASIC19.42■□□□□ 0.7
Ubr1O70481 Gm43170-201ENSMUST00000199827 612 ntBASIC19.42■□□□□ 0.7
Ubr1O70481 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ubr1O70481 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC19.42■□□□□ 0.7
Ubr1O70481 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.42■□□□□ 0.7
Ubr1O70481 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC19.42■□□□□ 0.7
Ubr1O70481 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Ubr1O70481 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Ubr1O70481 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Ubr1O70481 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC19.41■□□□□ 0.7
Ubr1O70481 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC19.41■□□□□ 0.7
Ubr1O70481 Gm7820-201ENSMUST00000121012 1052 ntBASIC19.41■□□□□ 0.7
Ubr1O70481 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Ubr1O70481 Gm21854-201ENSMUST00000179901 471 ntBASIC19.41■□□□□ 0.7
Ubr1O70481 Gm45059-201ENSMUST00000205558 1077 ntBASIC19.41■□□□□ 0.7
Ubr1O70481 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Ubr1O70481 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Ubr1O70481 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.41■□□□□ 0.7
Ubr1O70481 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC19.41■□□□□ 0.7
Ubr1O70481 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Ubr1O70481 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 BC001981-202ENSMUST00000191393 1545 ntBASIC19.4■□□□□ 0.7
Ubr1O70481 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 Trav13-3-201ENSMUST00000117226 336 ntBASIC19.4■□□□□ 0.7
Ubr1O70481 Gm12859-201ENSMUST00000117834 427 ntBASIC19.4■□□□□ 0.7
Ubr1O70481 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC19.4■□□□□ 0.7
Ubr1O70481 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Ubr1O70481 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Ubr1O70481 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC19.4■□□□□ 0.7
Ubr1O70481 AC238811.1-201ENSMUST00000225302 441 ntBASIC19.4■□□□□ 0.7
Ubr1O70481 Mir125a-201ENSMUST00000083545 68 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms