Protein–RNA interactions for Protein: O70138

Mmp8, Neutrophil collagenase, mousemouse

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp8O70138 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC18.49■□□□□ 0.55
Mmp8O70138 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Mmp8O70138 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 AC174678.1-201ENSMUST00000228007 2749 ntBASIC18.48■□□□□ 0.55
Mmp8O70138 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC18.48■□□□□ 0.55
Mmp8O70138 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Mmp8O70138 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Mmp8O70138 Gm16198-201ENSMUST00000118766 670 ntBASIC18.48■□□□□ 0.55
Mmp8O70138 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC18.48■□□□□ 0.55
Mmp8O70138 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC18.48■□□□□ 0.55
Mmp8O70138 Gm5712-201ENSMUST00000199748 1043 ntBASIC18.48■□□□□ 0.55
Mmp8O70138 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 AC090659.1-201ENSMUST00000224334 768 ntBASIC18.48■□□□□ 0.55
Mmp8O70138 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Mmp8O70138 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC18.48■□□□□ 0.55
Mmp8O70138 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Mmp8O70138 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC18.48■□□□□ 0.55
Mmp8O70138 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Mmp8O70138 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Gm2272-201ENSMUST00000194903 582 ntBASIC18.47■□□□□ 0.55
Mmp8O70138 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.47■□□□□ 0.55
Mmp8O70138 Thap2-203ENSMUST00000218989 527 ntBASIC18.47■□□□□ 0.55
Mmp8O70138 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Mmp8O70138 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC18.47■□□□□ 0.55
Mmp8O70138 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC18.47■□□□□ 0.55
Mmp8O70138 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Mmp8O70138 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Mmp8O70138 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.46■□□□□ 0.55
Mmp8O70138 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC18.46■□□□□ 0.55
Mmp8O70138 Gm14494-201ENSMUST00000118786 435 ntBASIC18.46■□□□□ 0.55
Mmp8O70138 Gm15467-201ENSMUST00000120582 445 ntBASIC18.46■□□□□ 0.55
Mmp8O70138 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Mir7036b-201ENSMUST00000184791 63 ntBASIC18.46■□□□□ 0.55
Mmp8O70138 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC18.46■□□□□ 0.55
Mmp8O70138 AC154572.2-201ENSMUST00000225105 997 ntBASIC18.46■□□□□ 0.55
Mmp8O70138 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Mmp8O70138 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Mmp8O70138 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC18.46■□□□□ 0.55
Mmp8O70138 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Mmp8O70138 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC18.45■□□□□ 0.54
Mmp8O70138 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC18.45■□□□□ 0.54
Mmp8O70138 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC18.45■□□□□ 0.54
Mmp8O70138 Gm43332-201ENSMUST00000202511 1044 ntBASIC18.45■□□□□ 0.54
Mmp8O70138 AC174742.1-201ENSMUST00000218272 304 ntBASIC18.45■□□□□ 0.54
Mmp8O70138 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC18.45■□□□□ 0.54
Mmp8O70138 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Gm10175-201ENSMUST00000086013 645 ntBASIC18.45■□□□□ 0.54
Mmp8O70138 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
Mmp8O70138 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp8O70138 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp8O70138 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp8O70138 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC18.44■□□□□ 0.54
Mmp8O70138 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Mmp8O70138 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms