Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.63□□□□□ -0.07
Cacna1bO55017 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.63□□□□□ -0.07
Cacna1bO55017 Gm27920-201ENSMUST00000183953 96 ntBASIC14.63□□□□□ -0.07
Cacna1bO55017 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC14.63□□□□□ -0.07
Cacna1bO55017 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC14.63□□□□□ -0.07
Cacna1bO55017 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.63□□□□□ -0.07
Cacna1bO55017 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.63□□□□□ -0.07
Cacna1bO55017 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Cacna1bO55017 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.63□□□□□ -0.07
Cacna1bO55017 Gm18062-201ENSMUST00000208020 547 ntBASIC14.63□□□□□ -0.07
Cacna1bO55017 Gm18055-201ENSMUST00000208254 547 ntBASIC14.63□□□□□ -0.07
Cacna1bO55017 Gm6888-201ENSMUST00000221983 706 ntBASIC14.63□□□□□ -0.07
Cacna1bO55017 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Cacna1bO55017 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cacna1bO55017 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Cacna1bO55017 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC14.62□□□□□ -0.07
Cacna1bO55017 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Gm9063-201ENSMUST00000223299 582 ntBASIC14.62□□□□□ -0.07
Cacna1bO55017 AC160980.1-201ENSMUST00000224136 970 ntBASIC14.62□□□□□ -0.07
Cacna1bO55017 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Cacna1bO55017 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Cacna1bO55017 Gm14928-201ENSMUST00000120198 477 ntBASIC14.61□□□□□ -0.07
Cacna1bO55017 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC14.61□□□□□ -0.07
Cacna1bO55017 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.61□□□□□ -0.07
Cacna1bO55017 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC14.61□□□□□ -0.07
Cacna1bO55017 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Cacna1bO55017 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Syt7-205ENSMUST00000224135 1557 ntBASIC14.61□□□□□ -0.07
Cacna1bO55017 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Cacna1bO55017 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Cacna1bO55017 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC14.6□□□□□ -0.07
Cacna1bO55017 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Cacna1bO55017 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms