Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.69■□□□□ 0.26
Prom1O54990 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Gm2423-201ENSMUST00000074863 733 ntBASIC16.69■□□□□ 0.26
Prom1O54990 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Prom1O54990 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Prom1O54990 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Prom1O54990 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 A830009L08Rik-201ENSMUST00000181054 2807 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Gm38225-201ENSMUST00000194001 393 ntBASIC16.68■□□□□ 0.26
Prom1O54990 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC16.68■□□□□ 0.26
Prom1O54990 Gm6888-201ENSMUST00000221983 706 ntBASIC16.68■□□□□ 0.26
Prom1O54990 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Prom1O54990 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Prom1O54990 Dancr-204ENSMUST00000132389 2347 ntBASIC16.68■□□□□ 0.26
Prom1O54990 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Prom1O54990 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.68■□□□□ 0.26
Prom1O54990 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Gm42901-201ENSMUST00000197735 3171 ntBASIC16.67■□□□□ 0.26
Prom1O54990 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Prom1O54990 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Prom1O54990 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Gm27989-201ENSMUST00000184721 107 ntBASIC16.67■□□□□ 0.26
Prom1O54990 Mir6977-201ENSMUST00000184960 64 ntBASIC16.67■□□□□ 0.26
Prom1O54990 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Prom1O54990 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Prom1O54990 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Prom1O54990 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Gm8410-201ENSMUST00000117225 605 ntBASIC16.66■□□□□ 0.26
Prom1O54990 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.66■□□□□ 0.26
Prom1O54990 Gm9824-201ENSMUST00000178707 561 ntBASIC16.66■□□□□ 0.26
Prom1O54990 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.66■□□□□ 0.26
Prom1O54990 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC16.66■□□□□ 0.26
Prom1O54990 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Prom1O54990 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms