Protein–RNA interactions for Protein: O35690

Phox2b, Paired mesoderm homeobox protein 2B, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phox2bO35690 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.29■□□□□ 0.04
Phox2bO35690 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Phox2bO35690 Gm37648-201ENSMUST00000192072 2563 ntBASIC15.29■□□□□ 0.04
Phox2bO35690 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Gm8602-201ENSMUST00000184045 607 ntBASIC15.29■□□□□ 0.04
Phox2bO35690 Gm44136-201ENSMUST00000203819 1106 ntBASIC15.29■□□□□ 0.04
Phox2bO35690 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC15.29■□□□□ 0.04
Phox2bO35690 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Phox2bO35690 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.29■□□□□ 0.04
Phox2bO35690 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Phox2bO35690 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Phox2bO35690 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Phox2bO35690 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.29■□□□□ 0.04
Phox2bO35690 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Phox2bO35690 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.29■□□□□ 0.04
Phox2bO35690 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.29■□□□□ 0.04
Phox2bO35690 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Phox2bO35690 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.28■□□□□ 0.04
Phox2bO35690 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Phox2bO35690 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Phox2bO35690 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Phox2bO35690 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Phox2bO35690 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Gm12138-201ENSMUST00000122180 951 ntBASIC15.28■□□□□ 0.04
Phox2bO35690 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC15.28■□□□□ 0.04
Phox2bO35690 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC15.28■□□□□ 0.04
Phox2bO35690 Gm6745-201ENSMUST00000199216 526 ntBASIC15.28■□□□□ 0.04
Phox2bO35690 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.28■□□□□ 0.04
Phox2bO35690 Gm17872-201ENSMUST00000222550 532 ntBASIC15.28■□□□□ 0.04
Phox2bO35690 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Phox2bO35690 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Phox2bO35690 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC15.27■□□□□ 0.04
Phox2bO35690 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.27■□□□□ 0.04
Phox2bO35690 Gm9519-201ENSMUST00000206108 1337 ntBASIC15.27■□□□□ 0.04
Phox2bO35690 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Phox2bO35690 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Gm13829-201ENSMUST00000119600 138 ntBASIC15.27■□□□□ 0.04
Phox2bO35690 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC15.27■□□□□ 0.04
Phox2bO35690 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Phox2bO35690 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Phox2bO35690 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC15.27■□□□□ 0.04
Phox2bO35690 Gm18057-201ENSMUST00000208220 503 ntBASIC15.27■□□□□ 0.04
Phox2bO35690 Gm45384-201ENSMUST00000210451 277 ntBASIC15.27■□□□□ 0.04
Phox2bO35690 Gm6888-201ENSMUST00000221983 706 ntBASIC15.27■□□□□ 0.04
Phox2bO35690 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.27■□□□□ 0.04
Phox2bO35690 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Phox2bO35690 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Phox2bO35690 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Phox2bO35690 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Phox2bO35690 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Phox2bO35690 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Phox2bO35690 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Phox2bO35690 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Phox2bO35690 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC15.26■□□□□ 0.03
Phox2bO35690 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Phox2bO35690 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms