Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1i3O35627 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Nr1i3O35627 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Nr1i3O35627 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC16.31■□□□□ 0.2
Nr1i3O35627 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC16.31■□□□□ 0.2
Nr1i3O35627 Gm43767-201ENSMUST00000198933 381 ntBASIC16.31■□□□□ 0.2
Nr1i3O35627 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1i3O35627 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Nr1i3O35627 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nr1i3O35627 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nr1i3O35627 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1i3O35627 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
Nr1i3O35627 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1i3O35627 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nr1i3O35627 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.31■□□□□ 0.2
Nr1i3O35627 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC16.3■□□□□ 0.2
Nr1i3O35627 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Nr1i3O35627 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.3■□□□□ 0.2
Nr1i3O35627 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
Nr1i3O35627 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC16.3■□□□□ 0.2
Nr1i3O35627 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Nr1i3O35627 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.3■□□□□ 0.2
Nr1i3O35627 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
Nr1i3O35627 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.3■□□□□ 0.2
Nr1i3O35627 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nr1i3O35627 Gm29361-201ENSMUST00000183323 2000 ntBASIC16.29■□□□□ 0.2
Nr1i3O35627 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.29■□□□□ 0.2
Nr1i3O35627 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.29■□□□□ 0.2
Nr1i3O35627 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Nr1i3O35627 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.29■□□□□ 0.2
Nr1i3O35627 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
Nr1i3O35627 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC16.29■□□□□ 0.2
Nr1i3O35627 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC16.29■□□□□ 0.2
Nr1i3O35627 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nr1i3O35627 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.28■□□□□ 0.2
Nr1i3O35627 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Gm7977-201ENSMUST00000193787 748 ntBASIC16.28■□□□□ 0.2
Nr1i3O35627 Gm6089-201ENSMUST00000197666 938 ntBASIC16.28■□□□□ 0.2
Nr1i3O35627 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.28■□□□□ 0.2
Nr1i3O35627 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Nr1i3O35627 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Nr1i3O35627 Ggn-204ENSMUST00000208330 2205 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms