Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Efnb3O35393 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Efnb3O35393 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Efnb3O35393 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Efnb3O35393 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Efnb3O35393 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Efnb3O35393 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.01□□□□□ -0.49
Efnb3O35393 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Efnb3O35393 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12□□□□□ -0.49
Efnb3O35393 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC12□□□□□ -0.49
Efnb3O35393 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC12□□□□□ -0.49
Efnb3O35393 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12□□□□□ -0.49
Efnb3O35393 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Efnb3O35393 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Efnb3O35393 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Efnb3O35393 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Efnb3O35393 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Gm14722-201ENSMUST00000118943 689 ntBASIC12□□□□□ -0.49
Efnb3O35393 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Gm11860-201ENSMUST00000122346 1010 ntBASIC12□□□□□ -0.49
Efnb3O35393 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC12□□□□□ -0.49
Efnb3O35393 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC12□□□□□ -0.49
Efnb3O35393 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Efnb3O35393 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Efnb3O35393 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Gm43509-201ENSMUST00000196551 2594 ntBASIC12□□□□□ -0.49
Efnb3O35393 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12□□□□□ -0.49
Efnb3O35393 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Efnb3O35393 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Efnb3O35393 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Efnb3O35393 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Efnb3O35393 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Efnb3O35393 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Efnb3O35393 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms