Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Capn1O35350 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
Capn1O35350 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Capn1O35350 Gm37153-201ENSMUST00000193637 231 ntBASIC14.08□□□□□ -0.16
Capn1O35350 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.08□□□□□ -0.16
Capn1O35350 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Capn1O35350 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Capn1O35350 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Capn1O35350 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.08□□□□□ -0.16
Capn1O35350 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Capn1O35350 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC14.08□□□□□ -0.16
Capn1O35350 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Capn1O35350 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Capn1O35350 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Capn1O35350 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Capn1O35350 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.07□□□□□ -0.16
Capn1O35350 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.07□□□□□ -0.16
Capn1O35350 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.07□□□□□ -0.16
Capn1O35350 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Capn1O35350 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Gm27397-201ENSMUST00000184997 107 ntBASIC14.07□□□□□ -0.16
Capn1O35350 Gm45167-201ENSMUST00000208007 322 ntBASIC14.07□□□□□ -0.16
Capn1O35350 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.07□□□□□ -0.16
Capn1O35350 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.07□□□□□ -0.16
Capn1O35350 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Capn1O35350 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Capn1O35350 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Capn1O35350 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Capn1O35350 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Capn1O35350 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.07□□□□□ -0.16
Capn1O35350 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Capn1O35350 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.06□□□□□ -0.16
Capn1O35350 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Capn1O35350 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Capn1O35350 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Capn1O35350 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Capn1O35350 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.06□□□□□ -0.16
Capn1O35350 Mir3113-201ENSMUST00000175478 76 ntBASIC14.06□□□□□ -0.16
Capn1O35350 Mir8117-201ENSMUST00000184773 107 ntBASIC14.06□□□□□ -0.16
Capn1O35350 AC131709.1-201ENSMUST00000224731 1180 ntBASIC14.06□□□□□ -0.16
Capn1O35350 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.06□□□□□ -0.16
Capn1O35350 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
Capn1O35350 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC14.06□□□□□ -0.16
Capn1O35350 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.06□□□□□ -0.16
Capn1O35350 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Capn1O35350 Wnt10b-206ENSMUST00000228546 2709 ntBASIC14.06□□□□□ -0.16
Capn1O35350 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.05□□□□□ -0.16
Capn1O35350 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Gm14822-201ENSMUST00000122247 291 ntBASIC14.05□□□□□ -0.16
Capn1O35350 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.05□□□□□ -0.16
Capn1O35350 Gm4899-201ENSMUST00000178708 719 ntBASIC14.05□□□□□ -0.16
Capn1O35350 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Capn1O35350 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Capn1O35350 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Capn1O35350 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms