Protein–RNA interactions for Protein: O35114

Scarb2, Lysosome membrane protein 2, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb2O35114 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.19□□□□□ -0.14
Scarb2O35114 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Scarb2O35114 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC14.18□□□□□ -0.14
Scarb2O35114 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.18□□□□□ -0.14
Scarb2O35114 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Hoga1-201ENSMUST00000081714 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC14.18□□□□□ -0.14
Scarb2O35114 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC14.18□□□□□ -0.14
Scarb2O35114 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scarb2O35114 Gm4535-201ENSMUST00000182274 558 ntBASIC14.18□□□□□ -0.14
Scarb2O35114 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC14.18□□□□□ -0.14
Scarb2O35114 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC14.18□□□□□ -0.14
Scarb2O35114 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
Scarb2O35114 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Gm10355-201ENSMUST00000097146 517 ntBASIC14.18□□□□□ -0.14
Scarb2O35114 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scarb2O35114 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC14.18□□□□□ -0.14
Scarb2O35114 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scarb2O35114 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Scarb2O35114 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scarb2O35114 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC14.17□□□□□ -0.14
Scarb2O35114 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC14.17□□□□□ -0.14
Scarb2O35114 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scarb2O35114 Gm8318-201ENSMUST00000182954 872 ntBASIC14.17□□□□□ -0.14
Scarb2O35114 Gm27646-201ENSMUST00000183989 110 ntBASIC14.17□□□□□ -0.14
Scarb2O35114 Gm6296-201ENSMUST00000222599 943 ntBASIC14.17□□□□□ -0.14
Scarb2O35114 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scarb2O35114 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.17□□□□□ -0.14
Scarb2O35114 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.17□□□□□ -0.14
Scarb2O35114 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
Scarb2O35114 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.17□□□□□ -0.14
Scarb2O35114 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scarb2O35114 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scarb2O35114 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scarb2O35114 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scarb2O35114 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.16□□□□□ -0.14
Scarb2O35114 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scarb2O35114 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Gm11780-201ENSMUST00000136880 516 ntBASIC14.16□□□□□ -0.14
Scarb2O35114 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.16□□□□□ -0.14
Scarb2O35114 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC14.16□□□□□ -0.14
Scarb2O35114 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.16□□□□□ -0.14
Scarb2O35114 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scarb2O35114 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scarb2O35114 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms