Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Ebf3O08791 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
Ebf3O08791 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ebf3O08791 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.76■□□□□ 0.11
Ebf3O08791 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC15.76■□□□□ 0.11
Ebf3O08791 AC158982.1-201ENSMUST00000228377 901 ntBASIC15.76■□□□□ 0.11
Ebf3O08791 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Ebf3O08791 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC15.76■□□□□ 0.11
Ebf3O08791 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Ebf3O08791 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Ebf3O08791 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.75■□□□□ 0.11
Ebf3O08791 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.75■□□□□ 0.11
Ebf3O08791 Gm14057-201ENSMUST00000120631 482 ntBASIC15.75■□□□□ 0.11
Ebf3O08791 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.75■□□□□ 0.11
Ebf3O08791 Gm44872-201ENSMUST00000207864 420 ntBASIC15.75■□□□□ 0.11
Ebf3O08791 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.75■□□□□ 0.11
Ebf3O08791 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.75■□□□□ 0.11
Ebf3O08791 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Ebf3O08791 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Ebf3O08791 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.74■□□□□ 0.11
Ebf3O08791 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.74■□□□□ 0.11
Ebf3O08791 Gm13365-201ENSMUST00000121188 973 ntBASIC15.74■□□□□ 0.11
Ebf3O08791 Mir6956-201ENSMUST00000183598 62 ntBASIC15.74■□□□□ 0.11
Ebf3O08791 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.74■□□□□ 0.11
Ebf3O08791 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC15.74■□□□□ 0.11
Ebf3O08791 Gm18246-201ENSMUST00000221023 728 ntBASIC15.74■□□□□ 0.11
Ebf3O08791 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Ebf3O08791 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Ebf3O08791 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Ebf3O08791 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Ebf3O08791 Rbfox2-206ENSMUST00000227314 1810 ntBASIC15.73■□□□□ 0.11
Ebf3O08791 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Ebf3O08791 Ccbe1-202ENSMUST00000130300 1631 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Nrn1-204ENSMUST00000224323 1779 ntBASIC15.73■□□□□ 0.11
Ebf3O08791 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Ebf3O08791 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms