Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcof1O08784 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Tcof1O08784 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC17.73■□□□□ 0.43
Tcof1O08784 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcof1O08784 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tcof1O08784 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcof1O08784 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tcof1O08784 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Gm26308-201ENSMUST00000157768 69 ntBASIC17.72■□□□□ 0.43
Tcof1O08784 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Thap2-203ENSMUST00000218989 527 ntBASIC17.72■□□□□ 0.43
Tcof1O08784 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tcof1O08784 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC17.72■□□□□ 0.43
Tcof1O08784 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17.72■□□□□ 0.43
Tcof1O08784 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tcof1O08784 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tcof1O08784 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC17.72■□□□□ 0.43
Tcof1O08784 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Gm11839-201ENSMUST00000120647 1953 ntBASIC17.72■□□□□ 0.43
Tcof1O08784 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Tcof1O08784 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.72■□□□□ 0.43
Tcof1O08784 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Tcof1O08784 Gm16198-201ENSMUST00000118766 670 ntBASIC17.72■□□□□ 0.43
Tcof1O08784 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Tcof1O08784 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Tcof1O08784 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tcof1O08784 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.72■□□□□ 0.43
Tcof1O08784 Tmem161a-214ENSMUST00000182980 2080 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
Tcof1O08784 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Tcof1O08784 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Tcof1O08784 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC17.71■□□□□ 0.43
Tcof1O08784 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Tcof1O08784 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tcof1O08784 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Tcof1O08784 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC17.71■□□□□ 0.42
Tcof1O08784 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC17.71■□□□□ 0.42
Tcof1O08784 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC17.71■□□□□ 0.42
Tcof1O08784 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tcof1O08784 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC17.71■□□□□ 0.42
Tcof1O08784 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.71■□□□□ 0.42
Tcof1O08784 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
Tcof1O08784 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Tcof1O08784 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC17.7■□□□□ 0.42
Tcof1O08784 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tcof1O08784 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Tcof1O08784 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
Tcof1O08784 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tcof1O08784 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tcof1O08784 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC17.7■□□□□ 0.42
Tcof1O08784 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC17.7■□□□□ 0.42
Tcof1O08784 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tcof1O08784 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
Tcof1O08784 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
Tcof1O08784 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tcof1O08784 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms