Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Miip-206ENSMUST00000172710 1769 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.31■□□□□ 0.2
Usp35M0QWN7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp35M0QWN7 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp35M0QWN7 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Gm45167-201ENSMUST00000208007 322 ntBASIC16.3■□□□□ 0.2
Usp35M0QWN7 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.3■□□□□ 0.2
Usp35M0QWN7 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Klf15-204ENSMUST00000203607 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp35M0QWN7 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Gm25911-201ENSMUST00000157621 56 ntBASIC16.29■□□□□ 0.2
Usp35M0QWN7 Gm6257-201ENSMUST00000163864 910 ntBASIC16.29■□□□□ 0.2
Usp35M0QWN7 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.29■□□□□ 0.2
Usp35M0QWN7 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Usp35M0QWN7 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC16.28■□□□□ 0.2
Usp35M0QWN7 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Usp35M0QWN7 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Usp35M0QWN7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp35M0QWN7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp35M0QWN7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp35M0QWN7 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp35M0QWN7 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.27■□□□□ 0.2
Usp35M0QWN7 Gm11185-201ENSMUST00000117732 1007 ntBASIC16.27■□□□□ 0.2
Usp35M0QWN7 Gm19164-201ENSMUST00000210667 640 ntBASIC16.27■□□□□ 0.2
Usp35M0QWN7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Usp35M0QWN7 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Usp35M0QWN7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC16.27■□□□□ 0.19
Usp35M0QWN7 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp35M0QWN7 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Usp35M0QWN7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Usp35M0QWN7 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
Usp35M0QWN7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp35M0QWN7 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp35M0QWN7 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp35M0QWN7 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp35M0QWN7 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp35M0QWN7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Usp35M0QWN7 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Usp35M0QWN7 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms