Protein–RNA interactions for Protein: J3QMS8

Gm3415, Predicted gene 3415, mousemouse

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3415J3QMS8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Gm3415J3QMS8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Gm3415J3QMS8 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gm27628-201ENSMUST00000184911 107 ntBASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gm9682-201ENSMUST00000197505 556 ntBASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Gm3415J3QMS8 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm3415J3QMS8 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm3415J3QMS8 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Gm3415J3QMS8 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gm27528-202ENSMUST00000222916 2012 ntBASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gm11764-201ENSMUST00000120221 623 ntBASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gm18489-201ENSMUST00000172565 551 ntBASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gm8318-201ENSMUST00000182954 872 ntBASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gm7787-201ENSMUST00000216858 688 ntBASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Gm3415J3QMS8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3415J3QMS8 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Gm3415J3QMS8 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Gm3415J3QMS8 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms