Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Gm13034-201ENSMUST00000121342 3177 ntBASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Gm38318-201ENSMUST00000195769 1706 ntBASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Gm6184-201ENSMUST00000120403 1261 ntBASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Mir5131-201ENSMUST00000175426 93 ntBASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Gm7787-201ENSMUST00000216858 688 ntBASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 AC174678.1-201ENSMUST00000228007 2749 ntBASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.34□□□□□ -0.27
Trav13d-3J3QMG8 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13d-3J3QMG8 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.33□□□□□ -0.27
Trav13d-3J3QMG8 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trav13d-3J3QMG8 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trav13d-3J3QMG8 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Trav13d-3J3QMG8 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Gm13036-201ENSMUST00000117799 748 ntBASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Gm4899-201ENSMUST00000178708 719 ntBASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Gm27741-201ENSMUST00000185060 237 ntBASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Gm18195-201ENSMUST00000207604 706 ntBASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Trav13d-3J3QMG8 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Gm15590-201ENSMUST00000078419 552 ntBASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Trav13d-3J3QMG8 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms